Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024503.1 Corchorus olitorius cultivar O-4 contig24536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27215

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5017--5055
20
2.0
20
85
10
53
33
5
0
61
1.18
7381--7424
24
1.9
23
86
9
63
13
20
27
38
1.90
8184--8209
1
26.0
1
100
0
52
0
0
0
100
0.00
11665--11701
12
3.2
12
85
11
51
67
0
8
24
1.17
12980--13041
27
2.3
27
97
0
115
30
19
1
48
1.58
25810--25835
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!