Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024511.1 Corchorus olitorius cultivar O-4 contig24544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13806

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
429--455
10
2.7
10
100
0
54
88
0
11
0
0.50
8003--8092
31
2.9
32
86
5
130
24
8
21
45
1.80
9190--9242
22
2.4
22
87
9
72
39
16
28
15
1.89
9201--9242
22
2.0
22
95
4
77
42
14
28
14
1.84
11041--11086
20
2.3
21
81
11
60
34
4
0
60
1.16
11623--11657
16
2.2
16
94
0
61
45
25
14
14
1.82
11926--11954
13
2.2
13
100
0
58
55
6
24
13
1.63

Tables:   1

The End!