Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024515.1 Corchorus olitorius cultivar O-4 contig24548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17390

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3243--3367
45
2.7
44
79
10
128
38
18
14
28
1.90
6192--6240
21
2.3
20
83
10
62
18
8
6
67
1.37
10063--10211
22
6.9
22
75
11
137
35
15
9
39
1.80
10063--10210
43
3.4
43
77
10
151
35
14
9
39
1.79
14703--14938
22
10.6
22
69
8
138
33
13
10
41
1.79
14699--14856
44
3.5
45
77
8
153
32
15
10
42
1.80
14706--14921
112
1.9
112
82
1
272
35
12
10
41
1.78
15761--15823
29
2.2
29
85
5
83
25
11
25
38
1.89

Tables:   1

The End!