Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024516.1 Corchorus olitorius cultivar O-4 contig24549, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9460

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
830--971
31
4.6
31
89
0
185
30
28
24
16
1.96
828--971
62
2.3
62
87
0
207
31
28
24
15
1.96
1903--1968
31
2.1
31
94
0
114
53
13
6
27
1.63
4572--5006
132
3.3
131
88
2
617
34
14
17
32
1.91
4666--5067
131
3.1
130
85
4
382
35
15
18
31
1.91
5580--5634
26
2.0
28
89
6
87
49
18
3
29
1.64
6070--6131
3
21.3
3
93
6
110
33
0
0
66
0.92
7479--7544
33
2.0
33
85
5
89
45
13
16
24
1.84
7831--7857
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!