Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024519.1 Corchorus olitorius cultivar O-4 contig24552, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19195

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2004--2058
7
7.4
7
81
18
67
40
0
0
60
0.97
2006--2053
5
10.0
5
82
17
66
39
0
0
60
0.97
3810--3856
24
2.0
24
91
8
78
48
14
0
36
1.44
5618--5665
14
3.6
14
72
11
55
29
27
10
33
1.90
9347--9429
2
45.0
2
70
15
54
53
0
0
46
1.00
9347--9408
20
3.3
19
75
20
60
51
0
0
48
1.00
9349--9429
9
9.7
9
70
24
61
53
0
0
46
1.00
9349--9429
26
3.0
26
79
15
76
53
0
0
46
1.00
9365--9428
28
2.4
27
82
15
87
54
0
0
45
0.99
9367--9421
28
2.0
27
92
3
92
54
0
0
45
0.99
14769--14822
27
2.0
27
100
0
108
62
7
18
11
1.50
18935--19008
28
2.7
28
75
10
71
40
12
21
25
1.88

Tables:   1

The End!