Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024522.1 Corchorus olitorius cultivar O-4 contig24555, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12633

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1715--1746
11
2.6
13
90
9
50
68
9
0
21
1.17
3449--3490
21
2.0
22
90
4
68
40
4
0
54
1.21
4610--4780
94
1.8
92
90
3
272
40
12
13
33
1.82
6483--6524
21
2.0
22
90
4
68
40
4
0
54
1.21
7374--7509
71
1.9
70
88
4
202
34
5
10
50
1.59
9072--9139
35
1.9
35
100
0
136
23
13
30
32
1.93
11226--11594
183
2.0
183
99
0
729
33
14
20
31
1.93
11828--11998
94
1.8
92
90
3
272
40
12
13
33
1.82

Tables:   1

The End!