Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024523.1 Corchorus olitorius cultivar O-4 contig24556, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17695

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182--235
19
2.6
21
77
19
60
38
18
3
38
1.69
1650--1686
19
2.0
19
89
5
58
35
13
5
45
1.66
6430--6469
18
2.2
19
86
4
55
77
10
7
5
1.11
9954--9985
14
2.3
14
100
0
64
34
21
6
37
1.79
11824--11881
20
2.8
20
77
10
55
53
1
1
43
1.21
12349--12387
20
2.0
20
85
10
53
64
2
5
28
1.28
14632--14665
10
3.1
11
91
8
52
76
0
0
23
0.79
15661--15833
96
1.8
91
86
6
247
40
10
13
35
1.80

Tables:   1

The End!