Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024537.1 Corchorus olitorius cultivar O-4 contig24570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9490

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2448--2504
24
2.4
24
85
5
80
56
1
19
22
1.51
2486--2567
30
2.5
31
76
14
85
60
2
12
24
1.43
2576--2627
27
1.9
27
84
7
70
61
1
11
25
1.40
2594--2708
19
6.4
18
67
22
66
64
0
10
25
1.25
2613--2710
25
4.1
25
70
22
84
64
0
9
26
1.23
2550--2724
44
3.9
44
92
1
233
62
1
11
24
1.35
2592--2711
11
10.8
11
70
21
56
64
0
10
25
1.26
4294--4484
54
3.5
54
87
4
253
33
23
16
26
1.96
4515--4651
53
2.6
54
87
3
188
31
22
18
27
1.97
9040--9065
4
6.5
4
100
0
52
76
0
0
23
0.78

Tables:   1

The End!