Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024538.1 Corchorus olitorius cultivar O-4 contig24571, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10692

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2578--3036
40
11.6
40
89
1
699
32
19
29
18
1.95
7993--8050
30
2.0
30
89
3
91
22
15
8
53
1.69
8811--8905
41
2.3
41
77
0
100
48
12
14
24
1.79
9897--9928
16
2.0
16
93
0
55
18
6
46
28
1.73

Tables:   1

The End!