Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024542.1 Corchorus olitorius cultivar O-4 contig24575, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16695

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2342--2399
24
2.4
24
85
2
80
56
1
18
22
1.50
2402--2599
4
50.8
4
65
18
71
65
1
8
25
1.27
2413--2522
27
4.4
27
70
23
87
62
1
8
27
1.33
2429--2594
19
9.0
19
72
15
98
64
1
9
25
1.30
2512--2595
44
1.9
44
100
0
168
65
0
9
25
1.22
10150--10183
16
2.2
16
89
5
52
17
5
14
61
1.52
10516--10567
22
2.4
22
90
0
77
13
7
7
71
1.31
10516--10580
22
3.0
21
84
6
76
10
7
12
69
1.37
10528--10580
21
2.5
22
87
3
72
7
7
15
69
1.34
13797--13851
21
2.6
21
85
5
67
14
45
25
14
1.83

Tables:   1

The End!