Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024552.1 Corchorus olitorius cultivar O-4 contig24585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25057

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5588--6020
217
2.0
217
96
0
805
34
9
9
45
1.70
5948--6165
107
2.0
108
96
0
402
32
8
13
45
1.73
16630--16657
3
9.3
3
100
0
56
67
0
0
32
0.91
17100--17145
24
1.9
24
90
0
74
41
15
15
28
1.87
18233--18262
8
3.8
8
95
0
51
43
6
0
50
1.28
20421--20469
17
2.9
16
85
8
62
34
22
20
22
1.97
22042--22147
31
3.5
31
72
14
121
33
21
18
25
1.96
22187--22347
60
2.7
60
92
2
252
26
19
18
34
1.95
22189--22354
29
5.5
29
69
17
97
26
20
18
34
1.96

Tables:   1

The End!