Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024559.1 Corchorus olitorius cultivar O-4 contig24592, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13676

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--567
4
61.0
4
66
11
90
61
0
11
26
1.32
422--569
19
8.0
18
76
14
99
60
0
10
29
1.34
442--567
27
5.3
25
68
27
96
60
0
8
30
1.32
423--567
46
3.2
46
95
2
247
60
0
9
28
1.33
975--1026
26
2.0
26
100
0
104
50
26
0
23
1.50
5992--6086
27
3.4
27
86
2
118
41
29
13
15
1.86
11889--11948
29
2.0
30
87
6
86
38
8
18
35
1.81
13603--13676
39
1.9
38
86
8
105
32
10
8
48
1.67

Tables:   1

The End!