Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024563.1 Corchorus olitorius cultivar O-4 contig24596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16698

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
457--498
22
2.0
22
95
4
77
78
7
9
4
1.08
1716--1769
9
6.0
9
84
6
74
1
14
0
83
0.73
1727--1769
12
3.4
13
84
9
54
2
11
0
86
0.67
3526--3781
123
2.0
124
87
6
361
37
10
2
50
1.49
4630--4680
14
3.2
16
76
18
54
9
17
17
54
1.69
12455--12634
41
4.3
41
85
4
180
30
13
18
37
1.90
12434--12634
85
2.4
82
81
7
226
29
13
19
37
1.90
12730--12760
16
1.9
16
100
0
62
12
25
16
45
1.83
15878--15922
12
3.5
13
81
9
56
57
11
0
31
1.33

Tables:   1

The End!