Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024571.1 Corchorus olitorius cultivar O-4 contig24604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16842

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74--1328
325
3.8
331
79
6
1238
32
14
16
36
1.88
2327--2514
95
2.0
92
90
3
295
43
16
9
30
1.79
6871--7011
46
3.1
45
84
8
153
37
11
26
24
1.89
6898--6975
23
3.4
23
70
20
74
35
12
30
20
1.90
6897--7011
46
2.5
46
90
4
171
37
12
27
22
1.90
6912--6985
23
3.2
23
66
25
57
37
10
29
21
1.88
6921--6993
23
3.2
23
68
24
64
36
15
26
21
1.93
7521--7545
12
2.1
12
100
0
50
36
16
24
24
1.94
8126--8271
74
2.0
75
87
1
213
37
19
17
26
1.93
8329--8368
21
1.9
21
85
10
55
50
5
12
32
1.62
8635--8681
15
3.2
15
69
6
51
51
19
6
23
1.70
8896--8976
38
2.1
38
84
8
103
59
2
2
35
1.24
12335--12377
21
2.0
22
86
4
61
41
11
16
30
1.83

Tables:   1

The End!