Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024573.1 Corchorus olitorius cultivar O-4 contig24606, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55950

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16066--16115
21
2.3
21
81
18
59
58
0
0
42
0.98
19890--19914
12
2.1
12
100
0
50
0
24
0
76
0.80
27994--28066
28
2.6
28
89
2
103
39
21
17
20
1.92
28596--28850
43
6.0
44
72
12
149
37
27
11
23
1.90
28605--28726
44
2.9
42
77
12
133
38
27
13
21
1.90
28605--28874
84
3.2
83
84
7
325
38
26
11
23
1.89
28605--28865
41
6.2
43
75
8
216
37
26
11
24
1.90
29578--29719
37
3.8
37
88
0
185
23
16
42
18
1.89
29736--29807
30
2.4
30
79
6
85
26
13
30
29
1.94
41888--41926
18
2.2
18
85
0
51
66
5
20
7
1.36
48506--48536
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!