Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024583.1 Corchorus olitorius cultivar O-4 contig24616, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26792

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
203--239
2
19.0
2
94
5
67
48
0
0
51
1.00
453--715
107
2.5
105
91
1
411
40
8
9
41
1.67
1009--1095
42
2.1
42
93
4
149
20
28
17
33
1.95
12433--12458
11
2.4
11
100
0
52
69
7
15
7
1.35
19443--19468
11
2.4
11
100
0
52
69
7
15
7
1.35
20369--20510
71
2.0
68
90
6
223
39
11
6
42
1.67
21071--21105
13
2.7
13
95
0
61
51
11
8
28
1.67
21148--21210
32
2.0
31
84
9
83
41
14
7
36
1.75
26650--26703
22
2.5
21
85
5
72
16
5
29
48
1.69

Tables:   1

The End!