Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024610.1 Corchorus olitorius cultivar O-4 contig24643, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17666

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
146--225
21
3.8
21
76
0
79
21
5
56
17
1.60
2130--2169
2
20.5
2
94
5
73
50
0
0
50
1.00
5552--5580
14
2.1
14
100
0
58
62
6
6
24
1.45
9794--9873
41
2.0
40
87
7
117
55
20
10
15
1.68
10315--10354
21
2.0
21
90
5
64
47
30
5
17
1.69
10369--10416
25
1.9
25
87
8
71
41
31
10
16
1.82
11161--11544
180
2.1
177
83
4
475
36
14
14
34
1.87
11880--12367
241
2.0
243
91
2
804
37
11
17
33
1.86
16676--16705
1
30.0
1
100
0
60
0
0
0
100
0.00

Tables:   1

The End!