Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024620.1 Corchorus olitorius cultivar O-4 contig24653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36865

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1130--1154
2
12.5
2
100
0
50
48
0
0
52
1.00
2021--2189
34
4.7
35
82
8
189
30
14
17
37
1.90
2051--2230
74
2.4
75
77
12
192
28
15
17
39
1.89
2021--2250
108
2.1
106
78
7
232
30
14
17
37
1.89
8366--8427
26
2.4
26
94
0
106
38
16
11
33
1.84
14077--14124
21
2.3
21
82
7
62
72
8
2
16
1.18
27698--27723
11
2.4
11
100
0
52
7
15
7
69
1.35
28484--28525
15
2.7
15
92
3
66
11
9
14
64
1.50
36312--36431
36
3.2
36
80
5
132
59
10
16
14
1.61
36794--36865
2
36.0
2
100
0
144
0
0
50
50
1.00

Tables:   1

The End!