Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024626.1 Corchorus olitorius cultivar O-4 contig24659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16306

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
391--494
55
1.9
54
90
2
163
39
15
30
14
1.87
1428--1798
58
6.4
58
93
1
566
39
15
20
24
1.91
4035--4118
34
2.5
34
98
0
159
29
21
21
27
1.98
4032--4158
34
3.6
34
88
5
155
30
17
19
32
1.95
5491--5532
19
2.3
19
91
4
68
26
16
26
30
1.97
10908--10969
27
2.3
27
83
8
81
50
16
16
17
1.79
13311--13336
11
2.4
11
100
0
52
23
11
23
42
1.86
14137--14190
19
2.6
21
77
19
60
38
18
3
38
1.69
15027--15062
18
2.1
18
89
5
56
38
11
5
44
1.63

Tables:   1

The End!