Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024630.1 Corchorus olitorius cultivar O-4 contig24663, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14709

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3697--3750
20
2.7
21
85
8
76
55
18
9
16
1.67
10810--10846
18
2.0
19
94
5
67
64
10
13
10
1.49
12245--12390
42
3.5
42
78
0
157
22
24
19
33
1.97
12320--12410
42
2.2
42
83
0
110
25
28
17
28
1.98
12245--12410
84
2.0
84
81
2
199
22
25
18
33
1.97
13807--13837
15
2.1
15
93
0
53
29
22
29
19
1.98
13941--14217
143
1.9
142
90
2
439
27
19
22
31
1.98
14287--14563
72
3.8
72
96
0
509
24
19
20
35
1.96

Tables:   1

The End!