Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024634.1 Corchorus olitorius cultivar O-4 contig24667, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14951

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3077--3170
45
2.2
44
88
7
140
38
22
5
34
1.77
6477--6565
46
2.0
45
86
10
128
21
20
5
52
1.66
6484--6577
47
2.0
46
85
6
127
19
22
6
52
1.68
6551--6740
22
8.8
22
78
6
192
12
26
6
55
1.60
6779--7562
47
16.7
46
84
6
880
26
21
5
46
1.74
7563--7632
22
3.2
22
83
4
88
14
27
4
54
1.58
9160--9184
10
2.5
10
100
0
50
0
8
0
92
0.40
11308--11356
23
2.1
23
96
0
89
48
6
18
26
1.71
14433--14481
26
1.9
25
87
4
71
53
12
20
14
1.73

Tables:   1

The End!