Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024639.1 Corchorus olitorius cultivar O-4 contig24672, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6096

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
476--637
81
2.0
80
92
4
272
23
6
22
47
1.74
2845--2876
6
5.3
6
92
0
55
46
37
0
15
1.46
2906--3053
38
3.9
38
81
1
172
25
35
15
24
1.94
5293--5324
6
5.3
6
100
0
64
50
34
0
15
1.45
5354--5500
76
1.9
75
87
4
215
24
31
18
25
1.97
5354--5500
38
3.9
38
83
2
190
24
31
18
25
1.97

Tables:   1

The End!