Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024640.1 Corchorus olitorius cultivar O-4 contig24673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37080

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1741--1777
6
6.2
6
93
0
56
45
37
0
16
1.47
1807--1953
38
3.9
38
90
2
217
21
34
19
24
1.96
10150--10182
1
33.0
1
100
0
66
100
0
0
0
0.00
15715--15744
15
2.0
15
93
0
51
20
10
26
43
1.83
17537--17582
24
1.9
24
100
0
92
26
13
26
34
1.92
21888--21946
19
2.9
21
77
10
68
50
20
5
23
1.67
29808--29878
37
1.9
37
100
0
142
43
2
14
39
1.59
30894--30988
45
2.1
45
92
0
154
36
12
24
26
1.91
34598--34643
20
2.2
20
88
3
65
41
15
8
34
1.78
35727--35787
29
2.1
30
87
3
88
42
3
3
50
1.34
36861--36971
55
2.0
55
96
0
204
34
24
1
39
1.66
36869--36983
55
2.1
55
86
3
160
35
20
1
42
1.62

Tables:   1

The End!