Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024646.1 Corchorus olitorius cultivar O-4 contig24679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21092

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157--189
13
2.3
15
90
10
52
78
0
21
0
0.75
228--343
46
2.5
45
80
8
144
43
7
22
26
1.80
7914--7947
16
2.1
16
89
10
52
52
5
0
41
1.25
8849--8913
29
2.2
30
81
8
80
36
20
9
33
1.84
16512--16614
42
2.5
42
96
1
190
33
24
18
24
1.97
17931--17978
2
24.0
2
100
0
96
50
0
50
0
1.00
19637--19683
24
2.0
24
87
8
69
55
25
10
8
1.62

Tables:   1

The End!