Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024649.1 Corchorus olitorius cultivar O-4 contig24682, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18876

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6092--6197
27
3.9
27
97
0
203
17
43
18
19
1.88
7012--7046
17
2.1
17
94
0
61
20
8
17
54
1.68
8389--8430
3
14.0
3
100
0
84
66
0
0
33
0.92
9267--9329
22
2.8
21
80
17
65
68
1
28
1
1.08
10187--10225
13
3.0
13
80
0
51
12
5
17
64
1.46
15881--15922
22
2.0
21
85
4
57
30
4
4
59
1.39
16123--16158
2
18.0
2
88
11
56
47
2
0
50
1.15
16848--17087
115
2.1
117
93
2
412
52
4
12
30
1.57
17689--17740
29
1.9
26
85
14
70
63
3
1
30
1.23
18566--18621
24
2.3
24
82
11
69
57
0
10
32
1.33

Tables:   1

The End!