Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024661.1 Corchorus olitorius cultivar O-4 contig24694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3192

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2008
154
12.8
154
86
5
2812
41
19
17
20
1.90
87--2248
653
3.4
656
88
5
3312
41
19
17
21
1.90
743--2008
463
2.7
462
95
0
2212
41
19
17
21
1.90
1973--2047
39
1.9
39
100
0
150
40
20
12
28
1.87
1827--2201
193
1.9
193
95
0
678
41
19
16
22
1.90

Tables:   1

The End!