Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024666.1 Corchorus olitorius cultivar O-4 contig24699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13786

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--86
39
2.1
39
97
0
155
35
20
15
28
1.94
47--394
154
2.3
154
94
1
608
40
20
17
21
1.91
359--433
39
1.9
39
94
0
132
37
20
16
26
1.93
201--586
193
2.0
192
94
1
684
39
19
17
22
1.92
394--1134
153
4.9
154
90
4
1147
40
19
18
21
1.91
1354--1551
29
6.9
29
80
3
231
18
18
22
40
1.91
1354--1551
57
3.5
57
83
1
263
18
18
22
40
1.91
5899--5936
17
2.2
18
85
4
51
73
5
10
10
1.23
6629--8203
154
10.2
154
92
1
2534
41
19
17
21
1.90
11968--12108
69
2.1
68
94
1
246
41
16
22
19
1.89
11829--12261
222
2.0
222
93
0
749
42
18
18
21
1.90
12036--13786
154
11.3
154
89
2
2546
41
19
17
21
1.91

Tables:   1

The End!