Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024668.1 Corchorus olitorius cultivar O-4 contig24701, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25284

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3438--3487
6
7.7
6
84
10
55
22
2
12
64
1.37
3438--3487
14
3.8
12
82
15
55
22
2
12
64
1.37
3438--3487
20
2.5
19
87
6
64
22
2
12
64
1.37
3757--3830
2
39.5
2
74
17
70
52
1
1
44
1.17
3752--3830
23
3.4
23
84
10
90
53
1
1
44
1.16
9069--9145
27
2.9
27
86
1
102
38
23
18
19
1.93
12485--12519
13
2.8
13
86
4
54
2
11
0
85
0.69
18747--18772
11
2.4
11
100
0
52
7
15
7
69
1.35

Tables:   1

The End!