Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024669.1 Corchorus olitorius cultivar O-4 contig24702, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22628

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3910--3951
15
2.7
15
92
3
66
11
9
14
64
1.50
6893--6943
21
2.4
21
83
0
57
7
19
47
25
1.76
7344--7443
27
3.7
27
95
0
173
18
18
27
37
1.93
8577--8620
21
2.3
19
84
11
54
43
25
22
9
1.82
16318--16369
27
1.9
27
96
0
95
30
3
53
11
1.54
18005--18062
26
2.2
26
82
11
66
46
6
17
29
1.74
18022--18076
26
2.1
26
93
0
92
43
9
18
29
1.80
18480--18955
65
7.4
64
82
3
562
26
23
15
35
1.94
18485--18955
129
3.6
128
85
4
592
26
23
15
35
1.94
18485--18957
195
2.4
195
85
5
633
26
23
15
35
1.94
18956--19146
64
3.0
64
97
0
355
28
20
13
37
1.91
20304--20407
29
3.7
28
75
8
86
19
16
25
39
1.91
20333--20441
29
3.9
27
73
4
83
18
16
26
38
1.92

Tables:   1

The End!