Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024672.1 Corchorus olitorius cultivar O-4 contig24705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27281

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10152--10188
18
2.1
18
94
0
65
51
5
5
37
1.48
11334--11625
96
3.0
96
88
4
410
44
20
21
13
1.86
11340--11622
48
5.9
48
85
2
363
43
21
21
13
1.86
11344--11655
48
6.4
48
76
14
216
42
20
23
13
1.87
11627--12166
86
6.0
86
78
10
469
33
17
28
20
1.95
11627--12173
46
12.1
46
79
12
471
34
17
28
20
1.95
12745--13091
50
6.9
50
78
7
230
36
14
5
43
1.68
12966--13007
20
2.2
20
91
4
68
35
11
4
47
1.61
12855--13093
100
2.4
100
80
8
256
37
15
5
42
1.68
12963--13109
50
2.9
50
94
2
251
38
11
4
46
1.59
13016--13096
20
3.5
20
69
28
63
40
9
4
44
1.59
19688--19766
32
2.6
30
84
9
97
24
20
3
51
1.63
22541--22592
27
1.9
27
96
0
95
30
3
53
11
1.54
23920--23949
11
2.7
11
94
0
51
0
13
0
86
0.57
24240--24294
26
2.1
26
89
0
83
43
10
18
27
1.83
27238--27281
2
22.0
2
100
0
88
50
0
0
50
1.00

Tables:   1

The End!