Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024673.1 Corchorus olitorius cultivar O-4 contig24706, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7591

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2152--2244
42
2.2
42
85
9
120
24
24
10
39
1.87
2193--2473
139
2.0
139
93
0
481
25
20
11
42
1.85
3463--3505
14
3.2
13
79
20
52
67
0
18
13
1.23
3890--3932
23
2.0
23
90
9
72
67
13
2
16
1.33
4532--4670
50
2.8
51
85
3
192
33
16
15
35
1.90
5271--5588
50
6.3
50
96
0
573
29
27
14
28
1.95
5620--5857
35
6.8
34
88
6
318
30
19
20
29
1.97
5620--5857
70
3.4
70
89
5
358
30
19
20
29
1.97
5621--5857
105
2.3
105
91
5
381
30
19
20
29
1.97
6113--6209
27
3.7
26
78
13
108
15
16
30
37
1.90

Tables:   1

The End!