Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024677.1 Corchorus olitorius cultivar O-4 contig24710, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13949

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
198--241
23
1.9
23
85
0
61
15
22
29
31
1.95
1252--1301
26
1.9
26
87
0
73
16
20
10
54
1.70
4986--5030
10
4.7
10
89
10
76
28
0
37
33
1.58
4986--5030
18
2.3
20
92
7
76
28
0
37
33
1.58
7446--7491
21
2.2
21
88
0
65
13
23
47
15
1.80
10612--10643
14
2.2
15
94
5
57
84
6
3
6
0.86
11109--11148
15
2.6
16
88
4
55
62
12
10
15
1.54
11936--11970
9
3.7
10
85
14
56
28
0
37
34
1.58
13752--13903
76
2.0
76
81
7
175
17
28
29
24
1.97

Tables:   1

The End!