Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024678.1 Corchorus olitorius cultivar O-4 contig24711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27674

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6331--6362
8
4.1
8
92
8
57
75
12
0
12
1.06
6331--6362
15
2.1
16
94
5
57
75
12
0
12
1.06
7235--7327
42
2.2
42
81
9
109
53
3
16
26
1.58
18497--19157
39
17.2
39
75
6
447
25
19
17
38
1.93
18568--19157
77
7.6
77
76
5
467
24
18
18
38
1.93
18560--19088
193
2.7
191
79
6
535
25
19
17
38
1.93
18879--19151
115
2.4
115
80
4
325
22
18
19
39
1.92
19430--19567
29
4.8
29
81
1
170
18
16
24
39
1.91
23208--23244
15
2.4
16
86
9
58
10
5
18
64
1.43

Tables:   1

The End!