Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024688.1 Corchorus olitorius cultivar O-4 contig24721, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14587

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4211--4313
51
2.0
51
81
7
120
45
12
21
20
1.84
4709--4780
37
1.9
37
100
0
144
13
30
16
38
1.88
6752--6930
26
6.9
26
80
5
182
29
20
34
15
1.93
6739--6930
78
2.5
79
81
8
232
29
20
34
16
1.94
6743--6921
52
3.4
52
86
0
223
29
20
35
15
1.93
7058--7101
10
4.5
10
81
13
56
38
13
22
25
1.91
7097--7129
16
2.1
16
100
0
66
33
6
18
42
1.75
8110--8199
44
2.0
44
97
0
171
25
32
14
27
1.95
12647--12705
29
2.0
30
96
3
111
22
16
10
50
1.75
12668--12743
33
2.2
34
83
4
91
25
17
7
50
1.72
12708--12828
39
3.2
38
81
4
138
23
14
15
46
1.83
14047--14071
6
4.2
6
100
0
50
84
0
16
0
0.63

Tables:   1

The End!