Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024689.1 Corchorus olitorius cultivar O-4 contig24722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20302

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--41
2
21.0
2
95
5
75
48
0
0
51
1.00
2000--2060
20
2.8
22
78
12
72
34
18
11
36
1.86
2609--2650
21
2.0
21
95
0
75
21
19
26
33
1.97
6875--6948
36
2.1
36
86
0
103
36
16
4
43
1.67
10607--10670
24
2.7
24
90
0
101
14
28
20
37
1.91
10776--10813
3
13.0
3
94
5
69
34
0
31
34
1.58
13893--13930
15
2.4
16
83
16
53
52
2
0
44
1.14
15773--15896
61
2.0
63
88
4
189
31
6
8
54
1.55
15804--15893
13
7.0
13
73
14
71
30
5
8
55
1.53

Tables:   1

The End!