Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024690.1 Corchorus olitorius cultivar O-4 contig24723, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4199

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2023--2151
22
5.9
21
74
5
78
40
10
14
34
1.80
2204--2271
22
3.1
22
75
8
66
47
7
17
27
1.74
2288--2350
22
2.9
22
81
11
76
33
4
25
36
1.77
2387--2418
16
2.0
16
100
0
64
37
25
18
18
1.94
2429--2510
22
3.7
22
78
0
92
28
7
20
43
1.78
2426--2510
44
1.9
44
82
0
107
30
7
20
42
1.78
3718--3778
31
2.0
31
83
6
79
36
40
16
6
1.74
3758--3800
16
2.8
15
77
19
52
32
34
23
9
1.87

Tables:   1

The End!