Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024695.1 Corchorus olitorius cultivar O-4 contig24728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42705

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4136--4469
43
7.9
43
83
7
398
22
10
25
41
1.86
4140--4469
84
3.9
84
89
4
504
21
10
25
41
1.86
7099--7173
30
2.5
31
89
6
109
37
13
14
34
1.85
8099--8129
14
2.3
13
94
5
53
67
0
0
32
0.91
9400--9483
12
7.2
12
68
20
61
45
2
1
51
1.22
9401--9478
24
3.4
22
78
15
77
43
2
1
52
1.23
11484--11563
19
4.2
19
69
12
56
26
7
16
50
1.71
28834--28866
13
2.5
13
86
13
50
78
9
9
3
1.05
31030--31081
15
3.4
14
76
12
50
36
5
13
44
1.68
31030--31087
30
1.9
30
82
6
73
34
6
13
44
1.71
32040--32097
31
1.9
31
93
6
102
41
31
15
12
1.84
37616--37650
18
1.9
18
94
0
61
34
37
0
28
1.58
41568--41619
26
2.0
25
85
14
70
42
5
1
50
1.37
42322--42354
6
5.8
6
86
13
52
33
15
0
51
1.43
42322--42352
16
1.9
16
100
0
62
32
16
0
51
1.44

Tables:   1

The End!