Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024702.1 Corchorus olitorius cultivar O-4 contig24735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45791

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2056--2104
22
2.2
22
100
0
98
24
18
20
36
1.94
2434--2471
18
2.1
18
85
9
51
55
5
2
36
1.37
2902--2938
19
1.9
19
88
0
56
37
13
32
16
1.87
4540--4573
15
2.2
16
89
5
52
64
0
29
5
1.17
7206--7255
22
2.4
19
81
15
55
74
4
16
6
1.17
7766--8423
328
2.0
328
100
0
1316
27
23
18
29
1.98
19109--19142
15
2.2
16
89
5
52
64
0
29
5
1.17
22244--22302
31
1.9
31
96
3
111
27
16
6
49
1.71
22246--22310
31
2.3
28
87
12
89
26
13
7
52
1.67
24723--24837
59
1.9
59
89
3
178
34
16
15
33
1.91
29993--30043
19
2.6
20
84
6
77
19
31
33
15
1.93
37650--37690
20
2.1
19
90
4
64
19
29
36
14
1.92
41531--41567
18
2.0
19
94
5
67
16
16
2
64
1.40
44751--44817
2
33.5
2
90
0
107
47
2
1
47
1.26

Tables:   1

The End!