Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024730.1 Corchorus olitorius cultivar O-4 contig24763, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17974

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
648--683
16
2.2
16
100
0
72
19
22
25
33
1.97
2549--2600
23
2.3
22
83
12
61
32
0
15
51
1.43
5053--5147
32
3.0
32
84
3
111
48
20
7
24
1.74
5051--5183
32
4.2
32
77
6
94
50
20
7
21
1.73
12089--12118
15
2.0
15
93
0
51
33
26
16
23
1.96
17456--17516
32
1.9
32
93
6
106
26
16
6
50
1.69

Tables:   1

The End!