Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024731.1 Corchorus olitorius cultivar O-4 contig24764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35177

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
442--506
10
6.7
10
73
18
57
40
12
23
24
1.89
463--506
18
2.4
18
96
0
79
38
13
25
22
1.91
1098--1123
11
2.4
11
100
0
52
7
15
7
69
1.35
27968--28025
28
2.1
28
96
0
107
22
29
13
34
1.93
29066--29126
28
2.1
29
87
6
88
52
6
18
22
1.68
29327--29351
3
8.3
3
100
0
50
64
0
36
0
0.94
30881--31080
90
2.1
90
82
10
238
43
15
12
29
1.83

Tables:   1

The End!