Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024733.1 Corchorus olitorius cultivar O-4 contig24766, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6260

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1374--1440
26
2.5
27
87
2
91
34
5
17
41
1.74
1417--1498
43
1.9
43
84
0
110
32
6
21
39
1.78
1495--1604
7
15.9
7
96
1
159
22
0
20
57
1.41
1757--1822
33
2.0
33
84
0
87
31
4
21
42
1.73
1870--2087
55
4.0
55
80
9
157
33
21
16
28
1.95
1895--2088
54
3.5
55
80
10
184
34
21
15
28
1.95
2199--2505
37
8.3
36
77
5
254
44
15
15
23
1.86
2185--2428
74
3.3
74
88
1
353
45
14
15
24
1.84
2199--2467
149
1.8
149
85
1
387
44
15
15
24
1.86
2878--2932
26
2.1
26
100
0
110
38
23
7
30
1.82
3476--3519
21
2.1
21
87
4
63
0
18
2
79
0.83
4156--4220
14
4.8
13
87
12
87
38
10
7
43
1.68
4156--4220
28
2.4
27
87
10
96
38
10
7
43
1.68

Tables:   1

The End!