Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024738.1 Corchorus olitorius cultivar O-4 contig24771, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26713

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--617
252
2.1
255
94
1
926
35
17
20
27
1.94
7380--7428
24
2.0
25
92
4
82
46
22
30
0
1.52
8753--8813
30
2.0
30
100
0
122
22
27
16
32
1.96
9261--9335
25
3.0
25
98
1
143
20
13
16
50
1.77
9666--9698
17
1.9
17
100
0
66
24
18
24
33
1.97
9748--9784
11
3.5
11
78
14
51
16
18
18
45
1.85
11496--11553
30
1.9
30
92
0
98
17
8
34
39
1.80
24485--24587
52
2.0
53
96
1
190
13
12
13
60
1.60
24490--24575
29
3.2
29
62
29
71
13
11
16
58
1.64
24578--24620
15
2.9
15
86
6
61
4
13
0
81
0.84
24775--24817
21
2.0
21
100
0
86
51
13
4
30
1.62

Tables:   1

The End!