Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024742.1 Corchorus olitorius cultivar O-4 contig24775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13624

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2490--2547
30
1.9
30
82
10
73
31
37
24
6
1.82
2498--2550
15
3.5
15
75
12
54
30
35
26
7
1.84
3475--3699
75
3.0
74
84
5
274
20
21
16
42
1.89
3970--4017
2
24.5
2
80
19
57
47
2
2
47
1.25
5072--5310
131
1.8
133
88
4
367
47
2
11
38
1.53
5402--5431
15
2.0
15
100
0
60
53
0
13
33
1.40
6400--6426
2
13.5
2
100
0
54
51
0
48
0
1.00

Tables:   1

The End!