Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024754.1 Corchorus olitorius cultivar O-4 contig24787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21586

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1411--1440
15
1.9
16
93
6
53
60
10
10
20
1.57
7762--7842
30
2.7
30
84
5
101
28
17
12
41
1.85
7965--8060
31
3.1
31
90
0
138
42
12
14
30
1.83
8663--8900
125
1.9
125
83
5
311
35
10
0
53
1.41
8841--8882
21
2.0
21
86
4
59
38
4
0
57
1.20
9057--9151
31
3.1
32
92
4
151
34
14
10
40
1.81
10218--10256
2
19.5
2
83
0
51
48
0
0
51
1.00

Tables:   1

The End!