Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024756.1 Corchorus olitorius cultivar O-4 contig24789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7774

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
462--514
12
4.4
13
81
11
60
45
9
5
39
1.60
687--728
19
2.2
19
86
0
57
59
21
7
11
1.56
1871--1990
35
3.4
35
90
0
186
10
36
40
11
1.77
1929--2008
18
4.5
18
70
14
67
6
36
42
15
1.72
2040--2072
3
11.0
3
93
0
57
0
30
0
69
0.88
6771--6807
12
3.0
13
84
11
51
48
8
2
40
1.47
7000--7041
19
2.2
19
86
0
57
59
21
7
11
1.56

Tables:   1

The End!