Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024761.1 Corchorus olitorius cultivar O-4 contig24794, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25406

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
846--916
35
2.0
36
97
2
135
25
38
5
30
1.79
849--924
35
2.1
35
90
7
118
27
35
6
30
1.82
4053--4121
30
2.3
30
87
0
93
15
15
18
49
1.80
5998--6037
21
1.9
21
89
0
62
35
22
22
20
1.96
18256--18280
2
12.5
2
100
0
50
48
0
0
52
1.00
18589--18628
14
3.1
14
76
23
52
52
5
5
37
1.45
22135--22225
47
1.9
46
80
8
103
42
4
13
39
1.64
23596--23730
48
2.9
46
84
9
166
51
6
14
27
1.68

Tables:   1

The End!