Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024771.1 Corchorus olitorius cultivar O-4 contig24804, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16964

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2300--2340
12
3.4
12
96
0
73
53
26
14
4
1.61
6667--6705
20
1.9
21
89
5
62
35
10
12
41
1.77
8810--8891
29
2.8
30
81
7
87
25
25
13
35
1.93
8804--8882
29
2.6
31
78
8
90
22
26
12
37
1.90
9743--9769
13
2.1
13
100
0
54
25
7
29
37
1.83
13165--13211
22
2.1
22
100
0
94
19
4
12
63
1.44

Tables:   1

The End!