Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024773.1 Corchorus olitorius cultivar O-4 contig24806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39399

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3481--3516
2
18.0
2
100
0
72
50
0
0
50
1.00
6180--6302
64
2.0
59
92
7
201
54
16
11
17
1.70
17222--17551
41
7.8
43
82
7
397
43
25
9
21
1.83
17222--17548
85
3.9
85
91
1
525
43
25
9
22
1.82
21149--21233
3
28.3
3
100
0
170
67
0
0
32
0.91
22271--22307
13
2.8
14
80
12
51
27
0
10
62
1.28
24852--24940
40
2.2
40
81
2
106
39
21
11
28
1.87
25040--25069
13
2.3
13
94
0
51
40
6
40
13
1.71
25717--25760
21
2.1
21
91
4
72
38
9
9
43
1.68
31192--31248
29
1.9
29
89
3
87
22
21
14
42
1.88
34616--34710
46
2.1
45
98
2
181
55
24
0
20
1.43

Tables:   1

The End!