Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024780.1 Corchorus olitorius cultivar O-4 contig24813, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16497

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
610--645
18
2.0
18
100
0
72
50
0
5
44
1.25
719--777
29
2.0
29
86
0
82
33
3
6
55
1.43
2559--2595
19
1.9
19
94
0
65
48
5
13
32
1.65
4243--4272
15
1.9
16
93
6
53
53
0
0
46
1.00
6411--6459
25
2.0
25
91
0
80
14
30
18
36
1.90
8494--8571
32
2.4
32
89
0
120
33
35
20
10
1.86
8494--8649
16
9.3
16
71
14
73
32
34
20
12
1.90
8518--8635
7
14.8
8
65
21
52
30
33
22
13
1.92
8556--8631
39
1.9
39
84
5
100
30
32
22
14
1.94
9496--9614
16
7.6
16
77
10
120
34
34
21
9
1.86
9496--9610
48
2.4
47
85
4
151
33
35
20
9
1.86
12171--12265
28
3.4
28
94
0
154
26
24
17
31
1.97
16408--16497
29
3.0
29
71
17
94
31
20
18
30
1.96

Tables:   1

The End!