Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024781.1 Corchorus olitorius cultivar O-4 contig24814, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38207

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12738--13393
325
2.0
325
100
0
1312
42
15
13
29
1.85
16608--16640
2
16.5
2
93
0
57
48
0
3
48
1.17
21388--21421
2
17.5
2
93
6
61
50
0
0
50
1.00
22243--22460
111
2.0
111
97
0
409
43
12
10
33
1.76
26013--26179
31
5.4
31
83
2
156
18
24
25
31
1.97
26022--26179
62
2.5
63
82
4
187
18
24
24
32
1.97
26841--26865
6
4.2
6
100
0
50
52
32
0
16
1.44
28362--28460
40
2.4
43
81
10
116
42
25
12
20
1.86
28442--28507
31
2.1
31
94
0
114
48
19
12
19
1.80
33114--33365
139
1.8
137
87
4
360
50
3
11
35
1.54
38043--38099
26
2.1
27
80
6
71
38
3
3
54
1.35

Tables:   1

The End!